3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
CGAAAG
Length
6 nucleotides
Bulged bases
7QG8|1|N|A|1808
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_084 not in the Motif Atlas
Homologous match to HL_5J7L_179
Geometric discrepancy: 0.093
The information below is about HL_5J7L_179
Detailed Annotation
GNRA related
Broad Annotation
GNRA related
Motif group
HL_04783.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
9

Unit IDs

7QG8|1|N|C|1806
7QG8|1|N|G|1807
7QG8|1|N|A|1808
7QG8|1|N|A|1809
7QG8|1|N|A|1810
7QG8|1|N|G|1811

Current chains

Chain N
23S rRNA

Nearby chains

Chain P
50S ribosomal protein L2
Chain k
50S ribosomal protein L28

Coloring options:


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