3D structure

PDB id
7QG8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the collided E. coli disome - VemP-stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.97 Å

Loop

Sequence
GUAACUAUAAC
Length
11 nucleotides
Bulged bases
7QG8|1|N|A|1913
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QG8_086 not in the Motif Atlas
Geometric match to HL_5TBW_049
Geometric discrepancy: 0.1535
The information below is about HL_5TBW_049
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84702.1
Basepair signature
cWW-F-F-tHW-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7QG8|1|N|G|1910
7QG8|1|N|U|1911
7QG8|1|N|A|1912
7QG8|1|N|A|1913
7QG8|1|N|C|1914
7QG8|1|N|U|1915
7QG8|1|N|A|1916
7QG8|1|N|U|1917
7QG8|1|N|A|1918
7QG8|1|N|A|1919
7QG8|1|N|C|1920

Current chains

Chain N
23S rRNA

Nearby chains

Chain 0
Small subunit ribosomal RNA; SSU rRNA
Chain A
Transfer RNA; tRNA
Chain M
Transfer RNA; tRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1082 s