HL_7QG8_095

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

UGACGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_095 not in the Motif Atlas

Homologous match to HL_5J7L_190

Geometric discrepancy: 0.1204

The information below is about HL_5J7L_190

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QG8|1|N|U|2356
7QG8|1|N|G|2357
7QG8|1|N|A|2358
7QG8|1|N|C|2359
7QG8|1|N|G|2360
7QG8|1|N|G|2361

Current chains

Chain N

23S rRNA

Nearby chains

Chain Y

50S ribosomal protein L15

Chain j

50S ribosomal protein L27

Chain q

50S ribosomal protein L35