HL_7QG8_110

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

UCAGAGAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_110 not in the Motif Atlas

Geometric match to HL_8H9D_001

Geometric discrepancy: 0.3278

The information below is about HL_8H9D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.1

Basepair signature

cWW-F

Number of instances in this motif group

8

Unit IDs

7QG8|1|0|U|1010
7QG8|1|0|C|1011
7QG8|1|0|A|1012
7QG8|1|0|G|1013
7QG8|1|0|A|1014
7QG8|1|0|G|1015
7QG8|1|0|A|1016
7QG8|1|0|U|1017
7QG8|1|0|G|1018

Current chains

Chain 0

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S14

Chain t

30S ribosomal protein S19