3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QGH_015 not in the Motif Atlas
Homologous match to HL_5J7L_015
Geometric discrepancy: 0.0746
The information below is about HL_5J7L_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

7QGH|1|0|C|689
7QGH|1|0|G|690
7QGH|1|0|G|691
7QGH|1|0|U|692
7QGH|1|0|G|693
7QGH|1|0|A|694
7QGH|1|0|A|695
7QGH|1|0|A|696
7QGH|1|0|U|697
7QGH|1|0|G|698

Current chains

Chain 0
16S rRNA

Nearby chains

Chain 6
30S ribosomal protein S7
Chain A
30S ribosomal protein S11
Chain s
30S ribosomal protein S21

Coloring options:


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