HL_7QGH_044

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

7QGH|1|N|A|311

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_044 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1069

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

21

Unit IDs

7QGH|1|N|C|305
7QGH|1|N|U|306
7QGH|1|N|G|307
7QGH|1|N|G|308
7QGH|1|N|A|309
7QGH|1|N|A|310
7QGH|1|N|A|311
7QGH|1|N|G|312

Current chains

Chain N

23S rRNA

Nearby chains

Chain h

50S ribosomal protein L24