3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UGUUGAAAAA
Length
10 nucleotides
Bulged bases
7QGH|1|N|U|747, 7QGH|1|N|A|751, 7QGH|1|N|A|752
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QGH_057 not in the Motif Atlas
Homologous match to HL_7A0S_022
Geometric discrepancy: 0.1099
The information below is about HL_7A0S_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_88205.2
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
7

Unit IDs

7QGH|1|N|U|744
7QGH|1|N|G|745
7QGH|1|N|U|746
7QGH|1|N|U|747
7QGH|1|N|G|748
7QGH|1|N|A|749
7QGH|1|N|A|750
7QGH|1|N|A|751
7QGH|1|N|A|752
7QGH|1|N|A|753

Current chains

Chain N
23S rRNA

Nearby chains

Chain Q
50S ribosomal protein L3
Chain f
50S ribosomal protein L22
Chain n
50S ribosomal protein L32
Chain p
50S ribosomal protein L34

Coloring options:


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