HL_7QGH_061

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

UGCUAACG

Length

8 nucleotides

Bulged bases

7QGH|1|N|U|958, 7QGH|1|N|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_061 not in the Motif Atlas

Homologous match to HL_4WF9_027

Geometric discrepancy: 0.0889

The information below is about HL_4WF9_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QGH|1|N|U|955
7QGH|1|N|G|956
7QGH|1|N|C|957
7QGH|1|N|U|958
7QGH|1|N|A|959
7QGH|1|N|A|960
7QGH|1|N|C|961
7QGH|1|N|G|962

Current chains

Chain N

23S rRNA

Nearby chains

Chain O

5S ribosomal RNA; 5S rRNA

Chain Z

50S ribosomal protein L16