HL_7QGH_088

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7QGH|1|N|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_088 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.0954

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_85367.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7QGH|1|N|C|2248
7QGH|1|N|U|2249
7QGH|1|N|G|2250
7QGH|1|N|G|2251
7QGH|1|N|G|2252
7QGH|1|N|G|2253
7QGH|1|N|C|2254
7QGH|1|N|G|2255
7QGH|1|N|G|2256

Current chains

Chain N

23S rRNA

Nearby chains

Chain M

Transfer RNA; tRNA

Chain Z

50S ribosomal protein L16

Chain j

50S ribosomal protein L27