HL_7QGH_089

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7QGH|1|N|A|2268, 7QGH|1|N|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGH_089 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0721

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7QGH|1|N|C|2264
7QGH|1|N|U|2265
7QGH|1|N|A|2266
7QGH|1|N|A|2267
7QGH|1|N|A|2268
7QGH|1|N|G|2269
7QGH|1|N|A|2270
7QGH|1|N|G|2271
7QGH|1|N|U|2272
7QGH|1|N|A|2273
7QGH|1|N|A|2274
7QGH|1|N|C|2275
7QGH|1|N|G|2276

Current chains

Chain N

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L16

Chain j

50S ribosomal protein L27