3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UGAAGUAG
Length
8 nucleotides
Bulged bases
7QGH|1|N|G|2529
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QGH_096 not in the Motif Atlas
Homologous match to HL_5J7L_194
Geometric discrepancy: 0.0892
The information below is about HL_5J7L_194
Detailed Annotation
GNRA variation
Broad Annotation
GNRA variation
Motif group
HL_31585.4
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
20

Unit IDs

7QGH|1|N|U|2528
7QGH|1|N|G|2529
7QGH|1|N|A|2530
7QGH|1|N|A|2531
7QGH|1|N|G|2532
7QGH|1|N|U|2533
7QGH|1|N|A|2534
7QGH|1|N|G|2535

Current chains

Chain N
23S rRNA

Nearby chains

Chain T
50S ribosomal protein L6
Chain r
50S ribosomal protein L36

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1031 s