HL_7QGN_050

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7QGN|1|N|G|386, 7QGN|1|N|G|389

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGN_050 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0999

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7QGN|1|N|A|382
7QGN|1|N|C|383
7QGN|1|N|A|384
7QGN|1|N|C|385
7QGN|1|N|G|386
7QGN|1|N|U|387
7QGN|1|N|G|388
7QGN|1|N|G|389
7QGN|1|N|U|390
7QGN|1|N|A|391
7QGN|1|N|U|392

Current chains

Chain N

23S rRNA

Nearby chains

Chain k

50S ribosomal protein L28