HL_7QGR_016

3D structure

PDB id

7QGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGR_016 not in the Motif Atlas

Homologous match to HL_5J7L_016

Geometric discrepancy: 0.0643

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QGR|1|0|C|726
7QGR|1|0|G|727
7QGR|1|0|A|728
7QGR|1|0|A|729
7QGR|1|0|G|730
7QGR|1|0|G|731

Current chains

Chain 0

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S15

Chain I

30S ribosomal protein S18

Chain s

30S ribosomal protein S21