HL_7QGU_002

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UGUAAGCAA

Length

9 nucleotides

Bulged bases

7QGU|1|A|A|91

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_002 not in the Motif Atlas

Homologous match to HL_4WF9_002

Geometric discrepancy: 0.5838

The information below is about HL_4WF9_002

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_00911.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|U|87
7QGU|1|A|G|88
7QGU|1|A|U|89
7QGU|1|A|A|90
7QGU|1|A|A|91
7QGU|1|A|G|92
7QGU|1|A|C|93
7QGU|1|A|A|94
7QGU|1|A|A|95

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23

Chain U

50S ribosomal protein L24

Chain Z

50S ribosomal protein L29