HL_7QGU_010

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

7QGU|1|A|A|355

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_010 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1575

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

21

Unit IDs

7QGU|1|A|C|349
7QGU|1|A|U|350
7QGU|1|A|G|351
7QGU|1|A|G|352
7QGU|1|A|A|353
7QGU|1|A|A|354
7QGU|1|A|A|355
7QGU|1|A|G|356

Current chains

Chain A

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L24