HL_7QGU_012

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GUAACAGCC

Length

9 nucleotides

Bulged bases

7QGU|1|A|A|373, 7QGU|1|A|A|374, 7QGU|1|A|C|375

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_012 not in the Motif Atlas

Homologous match to HL_5J7L_144

Geometric discrepancy: 0.1586

The information below is about HL_5J7L_144

Detailed Annotation

T-loop with unstacked turn

Broad Annotation

T-loop

Motif group

HL_27670.2

Basepair signature

cWW-tWH-F-F

Number of instances in this motif group

13

Unit IDs

7QGU|1|A|G|371
7QGU|1|A|U|372
7QGU|1|A|A|373
7QGU|1|A|A|374
7QGU|1|A|C|375
7QGU|1|A|A|376
7QGU|1|A|G|377
7QGU|1|A|C|378
7QGU|1|A|C|379

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain U

50S ribosomal protein L24