3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
GGUAACAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7QGU_022 not in the Motif Atlas
Geometric match to HL_5AOX_001
Geometric discrepancy: 0.2763
The information below is about HL_5AOX_001
Detailed Annotation
GNRA with tandem sheared
Broad Annotation
No text annotation
Motif group
HL_98423.4
Basepair signature
cWW-F-F-F-F-F-F
Number of instances in this motif group
16

Unit IDs

7QGU|1|A|G|759
7QGU|1|A|G|760
7QGU|1|A|U|761
7QGU|1|A|A|762
7QGU|1|A|A|763
7QGU|1|A|C|764
7QGU|1|A|A|765
7QGU|1|A|C|766

Current chains

Chain A
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L2
Chain W
Small subunit ribosomal RNA; SSU rRNA
Chain t
30S ribosomal protein S15

Coloring options:


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