HL_7QGU_046

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UUUAGCAAAAA

Length

11 nucleotides

Bulged bases

7QGU|1|A|C|1811, 7QGU|1|A|A|1815

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_046 not in the Motif Atlas

Homologous match to HL_4WF9_043

Geometric discrepancy: 0.1913

The information below is about HL_4WF9_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87681.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|U|1806
7QGU|1|A|U|1807
7QGU|1|A|U|1808
7QGU|1|A|A|1809
7QGU|1|A|G|1810
7QGU|1|A|C|1811
7QGU|1|A|A|1812
7QGU|1|A|A|1813
7QGU|1|A|A|1814
7QGU|1|A|A|1815
7QGU|1|A|A|1816

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

YqzJ

Chain C

50S ribosomal protein L2

Chain d

50S ribosomal protein L34