HL_7QGU_050

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7QGU|1|A|U|1984

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_050 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.1435

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|G|1978
7QGU|1|A|G|1979
7QGU|1|A|U|1980
7QGU|1|A|A|1981
7QGU|1|A|A|1982
7QGU|1|A|G|1983
7QGU|1|A|U|1984
7QGU|1|A|U|1985
7QGU|1|A|C|1986

Current chains

Chain A

23S rRNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain W

Small subunit ribosomal RNA; SSU rRNA