HL_7QGU_061

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

AGUCCACAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_061 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.2807

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7QGU|1|A|A|2500
7QGU|1|A|G|2501
7QGU|1|A|U|2502
7QGU|1|A|C|2503
7QGU|1|A|C|2504
7QGU|1|A|A|2505
7QGU|1|A|C|2506
7QGU|1|A|A|2507
7QGU|1|A|U|2508

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

Ribosomal protein L6

Chain M

50S ribosomal protein L16

Chain f

50S ribosomal protein L36