HL_7QGU_067

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7QGU|1|A|G|2780, 7QGU|1|A|C|2784

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_067 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.1629

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7QGU|1|A|C|2774
7QGU|1|A|U|2775
7QGU|1|A|G|2776
7QGU|1|A|A|2777
7QGU|1|A|A|2778
7QGU|1|A|A|2779
7QGU|1|A|G|2780
7QGU|1|A|C|2781
7QGU|1|A|A|2782
7QGU|1|A|U|2783
7QGU|1|A|C|2784
7QGU|1|A|U|2785
7QGU|1|A|A|2786
7QGU|1|A|A|2787
7QGU|1|A|G|2788

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

Ribosomal protein L6

Chain J

50S ribosomal protein L13

Chain f

50S ribosomal protein L36