HL_7QGU_078

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

7QGU|1|W|G|274

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_078 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.175

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_87268.3

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7QGU|1|W|G|267
7QGU|1|W|G|268
7QGU|1|W|U|269
7QGU|1|W|A|270
7QGU|1|W|A|271
7QGU|1|W|C|272
7QGU|1|W|G|273
7QGU|1|W|G|274
7QGU|1|W|C|275

Current chains

Chain W

16S rRNA

Nearby chains

Chain v

30S ribosomal protein S17

Chain y

30S ribosomal protein S20