HL_7QGU_080

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GACUGAGACACGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_080 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1309

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7QGU|1|W|G|328
7QGU|1|W|A|329
7QGU|1|W|C|330
7QGU|1|W|U|331
7QGU|1|W|G|332
7QGU|1|W|A|333
7QGU|1|W|G|334
7QGU|1|W|A|335
7QGU|1|W|C|336
7QGU|1|W|A|337
7QGU|1|W|C|338
7QGU|1|W|G|339
7QGU|1|W|G|340
7QGU|1|W|C|341

Current chains

Chain W

16S rRNA

Nearby chains

Chain y

30S ribosomal protein S20