HL_7QGU_098

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

AUUCAGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_098 not in the Motif Atlas

Geometric match to HL_4LFB_025

Geometric discrepancy: 0.2248

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

7QGU|1|W|A|1143
7QGU|1|W|U|1144
7QGU|1|W|U|1145
7QGU|1|W|C|1146
7QGU|1|W|A|1147
7QGU|1|W|G|1148
7QGU|1|W|U|1149
7QGU|1|W|U|1150

Current chains

Chain W

16S rRNA

Nearby chains