HL_7QGU_110

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

GUUGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QGU_110 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.3409

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QGU|1|A|G|2333
7QGU|1|A|U|2334
7QGU|1|A|U|2335
7QGU|1|A|G|2336
7QGU|1|A|G|2337
7QGU|1|A|A|2338
7QGU|1|A|A|2339
7QGU|1|A|A|2340
7QGU|1|A|U|2341

Current chains

Chain A

23S rRNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain z

Transfer RNA; tRNA