HL_7QH6_010
3D structure
- PDB id
- 7QH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- AACCAAAU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QH6_010 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3183
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7QH6|1|A|A|2064
7QH6|1|A|A|2065
7QH6|1|A|C|2066
7QH6|1|A|C|2067
7QH6|1|A|A|2072
7QH6|1|A|A|2073
7QH6|1|A|A|2074
7QH6|1|A|U|2075
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain Z
- 39S ribosomal protein L30, mitochondrial
Coloring options: