HL_7QH6_024

3D structure

PDB id

7QH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UUGGGGCGA

Length

9 nucleotides

Bulged bases

7QH6|1|A|G|2814

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH6_024 not in the Motif Atlas

Homologous match to HL_4WF9_049

Geometric discrepancy: 0.3202

The information below is about HL_4WF9_049

Detailed Annotation

LSU P loop

Broad Annotation

LSU P loop

Motif group

HL_11974.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

19

Unit IDs

7QH6|1|A|U|2812
7QH6|1|A|U|2813
7QH6|1|A|G|2814
7QH6|1|A|G|2815
7QH6|1|A|G|2816
7QH6|1|A|G|2817
7QH6|1|A|C|2818
7QH6|1|A|G|2819
7QH6|1|A|A|2820

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain N

39S ribosomal protein L16, mitochondrial

Chain W

39S ribosomal protein L27, mitochondrial