HL_7QH6_029

3D structure

PDB id

7QH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

AGUAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH6_029 not in the Motif Atlas

Homologous match to HL_5J7L_196

Geometric discrepancy: 0.3718

The information below is about HL_5J7L_196

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7QH6|1|A|A|3081
7QH6|1|A|G|3082
7QH6|1|A|U|3083
7QH6|1|A|A|3084
7QH6|1|A|A|3085
7QH6|1|A|U|3086

Current chains

Chain A

16S ribosomal RNA

Nearby chains