HL_7QH6_035

3D structure

PDB id

7QH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

ACUUACACU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH6_035 not in the Motif Atlas

Geometric match to HL_7RQB_022

Geometric discrepancy: 0.3242

The information below is about HL_7RQB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7QH6|1|B|A|1630
7QH6|1|B|C|1631
7QH6|1|B|U|1632
7QH6|1|B|U|1633
7QH6|1|B|A|1634
7QH6|1|B|C|1635
7QH6|1|B|A|1636
7QH6|1|B|C|1637
7QH6|1|B|U|1638

Current chains

Chain B

mitochondrial tRNAVal

Nearby chains

Chain 6

39S ribosomal protein L38, mitochondrial

Chain P

39S ribosomal protein L18, mitochondrial

Chain W

39S ribosomal protein L27, mitochondrial