HL_7QH7_022

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CUUAAAUAG

Length

9 nucleotides

Bulged bases

7QH7|1|A|U|2618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH7_022 not in the Motif Atlas

Geometric match to HL_5TBW_050

Geometric discrepancy: 0.1831

The information below is about HL_5TBW_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7QH7|1|A|C|2612
7QH7|1|A|U|2613
7QH7|1|A|U|2614
7QH7|1|A|A|2615
7QH7|1|A|A|2616
7QH7|1|A|A|2617
7QH7|1|A|U|2618
7QH7|1|A|A|2619
7QH7|1|A|G|2620

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain L

39S ribosomal protein L14, mitochondrial