HL_7QH7_032

3D structure

PDB id

7QH7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 4

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QH7_032 not in the Motif Atlas

Geometric match to HL_5J7L_179

Geometric discrepancy: 0.296

The information below is about HL_5J7L_179

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_04783.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

7QH7|1|A|C|3126
7QH7|1|A|G|3127
7QH7|1|A|A|3128
7QH7|1|A|A|3129
7QH7|1|A|A|3130
7QH7|1|A|G|3131

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain u

Mitochondrial assembly of ribosomal large subunit protein 1