HL_7QIW_008
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7QIW|1|2|G|280, 7QIW|1|2|A|281, 7QIW|1|2|A|282
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QIW_008 not in the Motif Atlas
- Homologous match to HL_8C3A_008
- Geometric discrepancy: 0.0697
- The information below is about HL_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7QIW|1|2|U|275
7QIW|1|2|U|276
7QIW|1|2|U|277
7QIW|1|2|G|278
7QIW|1|2|G|279
7QIW|1|2|G|280
7QIW|1|2|A|281
7QIW|1|2|A|282
7QIW|1|2|U|283
7QIW|1|2|G|284
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain N
- 60S ribosomal protein L13
- Chain P
- Ribosomal protein L15
- Chain c
- Putative 60S ribosomal protein L27a-3-like
- Chain p
- 60S ribosomal protein eL42
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