HL_7QIZ_027
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- GGAUGAAC
- Length
- 8 nucleotides
- Bulged bases
- 7QIZ|1|2|A|1164, 7QIZ|1|2|A|1165
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QIZ_027 not in the Motif Atlas
- Homologous match to HL_8C3A_026
- Geometric discrepancy: 0.1146
- The information below is about HL_8C3A_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_44398.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7QIZ|1|2|G|1159
7QIZ|1|2|G|1160
7QIZ|1|2|A|1161
7QIZ|1|2|U|1162
7QIZ|1|2|G|1163
7QIZ|1|2|A|1164
7QIZ|1|2|A|1165
7QIZ|1|2|C|1166
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain 5
- 5S ribosomal RNA; 5S rRNA
- Chain I
- Thaliana 60S ribosomal protein L7
- Chain g
- 60S ribosomal protein eL32
- Chain h
- 60S ribosomal protein eL33
Coloring options: