HL_7QP6_009
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 7QP6|1|A|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP6_009 not in the Motif Atlas
- Geometric match to HL_4V88_195
- Geometric discrepancy: 0.0811
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7QP6|1|A|C|441
7QP6|1|A|C|442
7QP6|1|A|U|443
7QP6|1|A|G|444
7QP6|1|A|A|445
7QP6|1|A|G|446
7QP6|1|A|A|447
7QP6|1|A|A|448
7QP6|1|A|A|449
7QP6|1|A|C|450
7QP6|1|A|G|451
7QP6|1|A|G|452
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain C
- 40S ribosomal protein S4, X isoform
- Chain R
- 40S ribosomal protein S8
- Chain S
- 40S ribosomal protein S6
- Chain T
- 40S ribosomal protein S24
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