HL_7QP6_020
3D structure
- PDB id
- 7QP6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in open state (h48S AUG open)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP6_020 not in the Motif Atlas
- Geometric match to HL_5J7L_015
- Geometric discrepancy: 0.1117
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7QP6|1|A|A|957
7QP6|1|A|G|958
7QP6|1|A|G|959
7QP6|1|A|U|960
7QP6|1|A|G|961
7QP6|1|A|A|962
7QP6|1|A|A|963
7QP6|1|A|A|964
7QP6|1|A|U|965
7QP6|1|A|U|966
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 7
- mRNA
- Chain P
- 40S ribosomal protein S14
- Chain Q
- 40S ribosomal protein S26
- Chain r
- Eukaryotic translation initiation factor 2 subunit 1
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