HL_7QP7_022
3D structure
- PDB id
- 7QP7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 48S initiation complex in closed state (h48S AUG closed)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7QP7|1|A|U|1061
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QP7_022 not in the Motif Atlas
- Geometric match to HL_5J7L_017
- Geometric discrepancy: 0.1054
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7QP7|1|A|G|1054
7QP7|1|A|A|1055
7QP7|1|A|U|1056
7QP7|1|A|C|1057
7QP7|1|A|A|1058
7QP7|1|A|G|1059
7QP7|1|A|A|1060
7QP7|1|A|U|1061
7QP7|1|A|A|1062
7QP7|1|A|C|1063
7QP7|1|A|C|1064
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain 7
- mRNA
- Chain P
- 40S ribosomal protein S14
- Chain Q
- 40S ribosomal protein S26
- Chain r
- Eukaryotic translation initiation factor 2 subunit 1
- Chain w
- Transfer RNA; tRNA
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