HL_7QV3_019

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7QV3|1|V|G|458

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_019 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1081

The information below is about HL_7A0S_014

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7QV3|1|V|G|457
7QV3|1|V|G|458
7QV3|1|V|A|459
7QV3|1|V|C|460
7QV3|1|V|C|461
7QV3|1|V|A|462
7QV3|1|V|U|463
7QV3|1|V|C|464

Current chains

Chain V

23S ribosomal RNA

Nearby chains