HL_7QV3_049

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UUUAGCAAAAA

Length

11 nucleotides

Bulged bases

7QV3|1|V|A|1809, 7QV3|1|V|G|1810, 7QV3|1|V|C|1811, 7QV3|1|V|A|1815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_049 not in the Motif Atlas

Homologous match to HL_4WF9_043

Geometric discrepancy: 0.1502

The information below is about HL_4WF9_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87681.2

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

10

Unit IDs

7QV3|1|V|U|1806
7QV3|1|V|U|1807
7QV3|1|V|U|1808
7QV3|1|V|A|1809
7QV3|1|V|G|1810
7QV3|1|V|C|1811
7QV3|1|V|A|1812
7QV3|1|V|A|1813
7QV3|1|V|A|1814
7QV3|1|V|A|1815
7QV3|1|V|A|1816

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain C

50S ribosomal protein L2