HL_7QV3_065

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGUAGUCG

Length

8 nucleotides

Bulged bases

7QV3|1|V|G|2558

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_065 not in the Motif Atlas

Homologous match to HL_4WF9_057

Geometric discrepancy: 0.2081

The information below is about HL_4WF9_057

Detailed Annotation

GNRA variation

Broad Annotation

GNRA variation

Motif group

HL_46665.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7QV3|1|V|U|2557
7QV3|1|V|G|2558
7QV3|1|V|U|2559
7QV3|1|V|A|2560
7QV3|1|V|G|2561
7QV3|1|V|U|2562
7QV3|1|V|C|2563
7QV3|1|V|G|2564

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6