HL_7QV3_081

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GACUGAGACACGGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_081 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1538

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7QV3|1|a|G|328
7QV3|1|a|A|329
7QV3|1|a|C|330
7QV3|1|a|U|331
7QV3|1|a|G|332
7QV3|1|a|A|333
7QV3|1|a|G|334
7QV3|1|a|A|335
7QV3|1|a|C|336
7QV3|1|a|A|337
7QV3|1|a|C|338
7QV3|1|a|G|339
7QV3|1|a|G|340
7QV3|1|a|C|341

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20