HL_7QV3_106

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

GUUGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QV3_106 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.4652

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7QV3|1|V|G|2333
7QV3|1|V|U|2334
7QV3|1|V|U|2335
7QV3|1|V|G|2336
7QV3|1|V|G|2337
7QV3|1|V|A|2338
7QV3|1|V|A|2339
7QV3|1|V|A|2340
7QV3|1|V|U|2341

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5

Chain w

Endonuclease MutS2