HL_7QWQ_042

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GUUCGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_042 not in the Motif Atlas

Geometric match to HL_4V9F_039

Geometric discrepancy: 0.2589

The information below is about HL_4V9F_039

Detailed Annotation

Other HL

Broad Annotation

Other HL

Motif group

HL_67772.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7QWQ|1|5|G|2664
7QWQ|1|5|U|2665
7QWQ|1|5|U|2666
7QWQ|1|5|C|2667
7QWQ|1|5|G|2668
7QWQ|1|5|C|2669
7QWQ|1|5|C|2670

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19

Chain p

eL43