HL_7QWQ_071

3D structure

PDB id

7QWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ternary complex of ribosome nascent chain with SRP and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

GGAGAGGC

Length

8 nucleotides

Bulged bases

7QWQ|1|5|A|4909, 7QWQ|1|5|G|4910, 7QWQ|1|5|A|4911

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWQ_071 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.1442

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7QWQ|1|5|G|4907
7QWQ|1|5|G|4908
7QWQ|1|5|A|4909
7QWQ|1|5|G|4910
7QWQ|1|5|A|4911
7QWQ|1|5|G|4912
7QWQ|1|5|G|4913
7QWQ|1|5|C|4914

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain O

60S ribosomal protein L13a