HL_7QWR_017

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_017 not in the Motif Atlas

Geometric match to HL_5TBW_016

Geometric discrepancy: 0.118

The information below is about HL_5TBW_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7QWR|1|5|U|1389
7QWR|1|5|G|1390
7QWR|1|5|A|1391
7QWR|1|5|A|1392
7QWR|1|5|G|1393
7QWR|1|5|G|1394

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

L13

Chain Q

eL18

Chain a

60S ribosomal protein L27a

Chain i

60S ribosomal protein L36