HL_7QWR_024

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUCAG

Length

6 nucleotides

Bulged bases

7QWR|1|5|C|1676, 7QWR|1|5|A|1679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_024 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.307

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7QWR|1|5|C|1675
7QWR|1|5|C|1676
7QWR|1|5|U|1677
7QWR|1|5|C|1678
7QWR|1|5|A|1679
7QWR|1|5|G|1680

Current chains

Chain 5

28S rRNA

Nearby chains

Chain a

60S ribosomal protein L27a

Chain b

60S ribosomal protein L29

Chain o

eL42