HL_7QWR_039

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUCUCUUU

Length

9 nucleotides

Bulged bases

7QWR|1|5|U|2631

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_039 not in the Motif Atlas

Geometric match to HL_5TBW_037

Geometric discrepancy: 0.2567

The information below is about HL_5TBW_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01927.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7QWR|1|5|G|2624
7QWR|1|5|U|2625
7QWR|1|5|U|2626
7QWR|1|5|C|2627
7QWR|1|5|U|2628
7QWR|1|5|C|2629
7QWR|1|5|U|2630
7QWR|1|5|U|2631
7QWR|1|5|U|2632

Current chains

Chain 5

28S rRNA

Nearby chains

Chain R

60S ribosomal protein L19

Chain U

60S ribosomal protein L22

Chain u

Isoform 2 of Transcription factor BTF3