HL_7QWR_050

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAACUAUGAC

Length

11 nucleotides

Bulged bases

7QWR|1|5|A|3760

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_050 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.2189

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7QWR|1|5|G|3757
7QWR|1|5|U|3758
7QWR|1|5|A|3759
7QWR|1|5|A|3760
7QWR|1|5|C|3761
7QWR|1|5|U|3762
7QWR|1|5|A|3763
7QWR|1|5|U|3764
7QWR|1|5|G|3765
7QWR|1|5|A|3766
7QWR|1|5|C|3767

Current chains

Chain 5

28S rRNA

Nearby chains