HL_7QWR_051

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCUAAUUAG

Length

9 nucleotides

Bulged bases

7QWR|1|5|U|3802

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_051 not in the Motif Atlas

Geometric match to HL_5TBW_050

Geometric discrepancy: 0.1439

The information below is about HL_5TBW_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7QWR|1|5|U|3796
7QWR|1|5|C|3797
7QWR|1|5|U|3798
7QWR|1|5|A|3799
7QWR|1|5|A|3800
7QWR|1|5|U|3801
7QWR|1|5|U|3802
7QWR|1|5|A|3803
7QWR|1|5|G|3804

Current chains

Chain 5

28S rRNA

Nearby chains

Chain V

Ribosomal protein L23