HL_7QWR_052

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAACGGGC

Length

10 nucleotides

Bulged bases

7QWR|1|5|A|3876, 7QWR|1|5|A|3877, 7QWR|1|5|C|3878

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_052 not in the Motif Atlas

Geometric match to HL_5TBW_051

Geometric discrepancy: 0.131

The information below is about HL_5TBW_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.8

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7QWR|1|5|G|3873
7QWR|1|5|G|3874
7QWR|1|5|G|3875
7QWR|1|5|A|3876
7QWR|1|5|A|3877
7QWR|1|5|C|3878
7QWR|1|5|G|3879
7QWR|1|5|G|3880
7QWR|1|5|G|3881
7QWR|1|5|C|3882

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain e

Ribosomal protein L32