HL_7QWR_054

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGCGCC

Length

7 nucleotides

Bulged bases

7QWR|1|5|C|4142, 7QWR|1|5|C|4144

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QWR_054 not in the Motif Atlas

Geometric match to HL_4V88_197

Geometric discrepancy: 0.3453

The information below is about HL_4V88_197

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7QWR|1|5|G|4139
7QWR|1|5|C|4140
7QWR|1|5|G|4141
7QWR|1|5|C|4142
7QWR|1|5|G|4143
7QWR|1|5|C|4144
7QWR|1|5|C|4145

Current chains

Chain 5

28S rRNA

Nearby chains